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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21322.1PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: aav:Aave_4350 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding. (306 aa)    
Predicted Functional Partners:
ACS18424.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: pna:Pnap_1622 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
 
  
 0.948
ACS20569.1
KEGG: dac:Daci_2118 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the hyi family.
 
 
  0.927
ACS19526.1
PFAM: aminotransferase class V; KEGG: dac:Daci_3052 serine--glyoxylate transaminase.
  
 
 0.926
ACS22222.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pol:Bpro_0053 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
  
  
 
0.914
ACS18519.1
TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: pol:Bpro_2101 isocitrate lyase.
   
 
 0.913
ACS21833.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: pol:Bpro_0422 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
  
  
 
0.913
ACS16885.1
PFAM: FAD linked oxidase domain protein; KEGG: aav:Aave_0645 FAD linked oxidase domain-containing protein.
  
 
 0.907
ACS16886.1
PFAM: FAD linked oxidase domain protein; KEGG: dac:Daci_0304 FAD linked oxidase domain-containing protein.
  
 
 0.907
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
     
 0.907
gph
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.907
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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