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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21336.1PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bbt:BBta_1203 glutamate carboxypeptidase. (416 aa)    
Predicted Functional Partners:
ACS21335.1
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pna:Pnap_0459 acyl-CoA dehydrogenase domain-containing protein.
  
    0.696
ACS21337.1
KEGG: aav:Aave_4368 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.605
ACS21334.1
KEGG: pol:Bpro_4182 hypothetical protein.
       0.507
ACS18198.1
TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: vei:Veis_4736 aspartate racemase; Belongs to the aspartate/glutamate racemases family.
 
     0.467
ACS21339.1
Carbonate dehydratase; PFAM: carbonic anhydrase; KEGG: pol:Bpro_4189 carbonate dehydratase.
     
 0.450
argA
TIGRFAM: amino-acid N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; aspartate/glutamate/uridylate kinase; KEGG: pol:Bpro_2397 N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily.
  
  
 0.427
aceK
(Isocitrate dehydrogenase (NADP(+))) kinase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.
       0.426
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
  
 
 0.426
ACS21344.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_3063 short-chain dehydrogenase/reductase SDR.
 
 
   0.423
ACS20972.1
N-acyl-D-amino-acid deacylase; PFAM: D-aminoacylase domain protein; amidohydrolase; Amidohydrolase 3; KEGG: swd:Swoo_3252 N-acyl-D-amino-acid deacylase.
 
    0.401
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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