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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21351.1PFAM: metallophosphoesterase; KEGG: mpt:Mpe_A1721 putative DNA repair exonuclease. (274 aa)    
Predicted Functional Partners:
ACS21350.1
PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: mpt:Mpe_A2183 hypothetical protein.
 
   
 0.963
ACS21352.1
PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: pna:Pnap_3543 phosphoesterase, PA-phosphatase related.
 
   
 0.871
ACS19414.1
SMART: Ankyrin; KEGG: pol:Bpro_4103 ankyrin.
   
 
 0.628
ACS19474.1
Ankyrin; KEGG: pol:Bpro_2515 ankyrin.
   
 
 0.628
glyQ
KEGG: pol:Bpro_4203 glycyl-tRNA synthetase subunit alpha; TIGRFAM: glycyl-tRNA synthetase, alpha subunit; PFAM: glycyl-tRNA synthetase alpha subunit.
       0.468
ACS21347.1
TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: pol:Bpro_4201 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase.
     
 0.467
glyS
glycyl-tRNA synthetase, beta subunit; KEGG: pna:Pnap_0444 glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, beta subunit.
       0.464
ACS21345.1
PFAM: protein of unknown function DUF45; KEGG: pol:Bpro_4199 protein of unknown function DUF45.
 
     0.447
ACS21346.1
PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: pol:Bpro_4200 1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.429
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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