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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21355.1PFAM: carbonic anhydrase; KEGG: bbt:BBta_6172 putative carbonic anhydrase. (239 aa)    
Predicted Functional Partners:
cynS
Cyanate lyase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
  
 
 0.930
ACS21339.1
Carbonate dehydratase; PFAM: carbonic anhydrase; KEGG: pol:Bpro_4189 carbonate dehydratase.
  
  
 
0.908
ACS19466.1
PFAM: formate/nitrite transporter; KEGG: mno:Mnod_7925 formate/nitrite transporter.
  
  
 0.874
ACS20701.1
PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: pna:Pnap_0960 sulphate transporter.
 
  
 0.787
ACS19650.1
PFAM: ribulose bisphosphate carboxylase small chain; KEGG: mpt:Mpe_A2783 ribulose 1,5-bisphosphate carboxylase small subunit.
    
 
 0.746
ACS17890.1
KEGG: lch:Lcho_2406 phenylacetic acid degradation protein PaaY.
    
 
 0.682
ACS20069.1
KEGG: hypothetical protein.
    
 
 0.682
ACS21356.1
KEGG: bbt:BBta_6173 hypothetical protein.
       0.536
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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