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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21381.1PFAM: GumN family protein; KEGG: rpi:Rpic_4133 GumN family protein. (401 aa)    
Predicted Functional Partners:
ACS21380.1
KEGG: vei:Veis_4741 hypothetical protein.
       0.769
ACS21383.1
KEGG: sbn:Sbal195_2514 hypothetical protein.
 
    0.654
ACS21382.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_0448 glyoxalase/bleomycin resistance protein/dioxygenase.
       0.565
ACS21379.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: har:HEAR0058 putative TonB-dependent receptor protein.
       0.511
ACS20210.1
PFAM: YadA domain protein; Hep_Hag repeat-containing protein; Haemagluttinin domain protein; KEGG: bpl:BURPS1106A_2083 putative outer membrane protein.
  
     0.465
ACS21378.1
PFAM: protein of unknown function DUF461; nuclear export factor GLE1; KEGG: smd:Smed_1186 protein of unknown function DUF461.
       0.454
ACS21683.1
SMART: helix-turn-helix domain protein; KEGG: pna:Pnap_0307 helix-turn-helix domain-containing protein.
 
     0.421
ACS20299.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: par:Psyc_1330 endonuclease/exonuclease/phosphatase family protein.
  
     0.408
ACS17558.1
KEGG: pol:Bpro_1065 hypothetical protein.
  
     0.400
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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