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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21383.1KEGG: sbn:Sbal195_2514 hypothetical protein. (404 aa)    
Predicted Functional Partners:
ACS17048.1
KEGG: mpo:Mpop_0843 hypothetical protein.
  
 
   0.787
ACS21618.1
Hypothetical protein; KEGG: bmj:BMULJ_02752 glucoamylase.
  
   
 0.778
ACS21382.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_0448 glyoxalase/bleomycin resistance protein/dioxygenase.
       0.777
ACS17217.1
Hypothetical protein; KEGG: eba:ebA1686 serine/threonine protein kinase.
 
     0.775
ACS21066.1
PFAM: outer membrane efflux protein; KEGG: dac:Daci_2077 outer membrane efflux protein.
 
     0.775
ACS16920.1
PFAM: O-antigen polymerase; KEGG: har:HEAR0457 hypothetical protein.
  
     0.774
ACS17975.1
KEGG: ypi:YpsIP31758_4012 hypothetical protein.
 
  
 0.774
ACS21072.1
KEGG: dac:Daci_2082 hypothetical protein.
  
     0.774
ACS21916.1
Putative membrane protein involved in toxin uptake; KEGG: dac:Daci_2082 hypothetical protein.
  
     0.774
ACS16835.1
KEGG: cja:CJA_0124 hypothetical protein.
  
     0.773
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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