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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21391.1TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: dac:Daci_1117 membrane protein AbrB duplication. (353 aa)    
Predicted Functional Partners:
ACS21392.1
PFAM: protein of unknown function DUF399; KEGG: pol:Bpro_0441 hypothetical protein.
 
     0.774
ACS21870.1
KEGG: dia:Dtpsy_3448 putative transmembrane protein.
  
     0.536
ACS21719.1
KEGG: pol:Bpro_4643 protein of unknown function DUF1631.
 
     0.526
ACS17729.1
KEGG: ajs:Ajs_0672 hypothetical protein.
  
     0.509
ACS19482.1
PFAM: thioesterase superfamily protein; GCN5-related N-acetyltransferase; KEGG: pol:Bpro_2524 4-hydroxybenzoyl-CoA thioesterase.
  
     0.450
ACS20217.1
KEGG: dac:Daci_2801 Asp/Glu racemase.
  
     0.436
ACS21882.1
PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_0186 major facilitator transporter.
  
   
 0.422
ACS19844.1
PFAM: GTP-binding protein HSR1-related; KEGG: tmz:Tmz1t_0511 GTP-binding protein HSR1-related.
 
     0.417
ACS16997.1
KEGG: aav:Aave_0771 hypothetical protein.
  
     0.415
ACS19843.1
KEGG: eba:ebA138 hypothetical protein.
  
     0.409
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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