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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21403.1PFAM: regulatory protein TetR; KEGG: pna:Pnap_3496 TetR family transcriptional regulator. (211 aa)    
Predicted Functional Partners:
ACS17013.1
TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein; KEGG: pol:Bpro_4024 poly granule associated.
  
     0.710
ACS17011.1
KEGG: pna:Pnap_3497 hypothetical protein.
  
 
 
 0.646
ACS21404.1
Hypothetical protein; KEGG: dia:Dtpsy_0552 poly(hydroxyalkanoate) granule-associated protein.
       0.625
ACS21405.1
KEGG: atc:AGR_C_2490 hypothetical protein.
       0.603
ACS21402.1
KEGG: bja:blr2889 hypothetical protein.
       0.561
ACS20208.1
KEGG: pna:Pnap_1357 hypothetical protein.
  
     0.525
ACS21406.1
TIGRFAM: acyltransferase, WS/DGAT/MGAT; PFAM: protein of unknown function UPF0089; KEGG: pol:Bpro_2303 diacylglycerol O-acyltransferase.
 
     0.470
ACS21780.1
PFAM: O-antigen polymerase; KEGG: pol:Bpro_4672 O-antigen polymerase.
  
     0.429
ACS20989.1
PFAM: protein of unknown function DUF962; KEGG: pol:Bpro_1273 protein of unknown function DUF962.
  
     0.416
ACS17140.1
KEGG: aav:Aave_0425 hypothetical protein.
  
    0.415
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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