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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21411.1KEGG: aav:Aave_2153 hypothetical protein. (230 aa)    
Predicted Functional Partners:
ACS17927.1
KEGG: xcc:XCC0033 hypothetical protein.
  
     0.649
ACS21409.1
Membrane protein-like protein; KEGG: mno:Mnod_4389 hypothetical protein.
       0.618
ACS21410.1
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rpc:RPC_4713 MarR family transcriptional regulator.
       0.618
ACS21412.1
KEGG: lch:Lcho_1238 putative fructose transport system kinase.
       0.558
ACS21413.1
PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: lch:Lcho_1626 Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
 
     0.550
ACS22020.1
Conserved hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
     0.448
ACS18062.1
PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: pol:Bpro_3619 peptidase S16, lon-like.
  
     0.437
ACS19716.1
PFAM: protein of unknown function DUF748; KEGG: pol:Bpro_2872 protein of unknown function DUF748.
  
     0.430
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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