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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21439.1KEGG: pna:Pnap_0262 hypothetical protein. (183 aa)    
Predicted Functional Partners:
ACS21440.1
KEGG: aav:Aave_0383 alpha/beta hydrolase fold.
 
     0.845
ACS21441.1
KEGG: pol:Bpro_0333 hypothetical protein.
 
     0.844
ACS18077.1
PFAM: protein of unknown function DUF339; KEGG: pol:Bpro_3604 protein of unknown function DUF339.
  
     0.711
ACS20703.1
KEGG: pol:Bpro_0907 hypothetical protein.
  
     0.708
ACS21711.1
PFAM: branched-chain amino acid transport; KEGG: pol:Bpro_4636 branched-chain amino acid transport.
 
     0.695
ACS20391.1
PFAM: alpha/beta hydrolase fold; KEGG: rfr:Rfer_2699 alpha/beta hydrolase.
  
     0.650
ACS18281.1
KEGG: ajs:Ajs_1187 putative transmembrane protein.
  
     0.612
ACS20995.1
KEGG: ajs:Ajs_3529 hypothetical protein.
  
     0.610
ACS18282.1
PFAM: molybdopterin binding domain; KEGG: pol:Bpro_1806 molybdopterin binding domain.
  
     0.609
ACS18796.1
KEGG: pol:Bpro_2673 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein.
  
     0.608
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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