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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21467.1PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: vei:Veis_3267 oxidoreductase domain-containing protein. (387 aa)    
Predicted Functional Partners:
ACS21811.1
PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein; KEGG: nar:Saro_0453 xylose isomerase-like TIM barrel.
 
  
 0.915
ACS21468.1
KEGG: bph:Bphy_2242 ABC sugar transporter, periplasmic ligand binding protein.
 
  
 0.743
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: aav:Aave_1204 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.671
ACS19938.1
4-hydroxyphenylpyruvate dioxygenase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pst:PSPTO_2346 4-hydroxyphenylpyruvate dioxygenase, putative.
  
  
 0.660
ACS21466.1
PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: mpt:Mpe_A2021 hypothetical protein.
  
    0.642
ACS17405.1
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: dia:Dtpsy_0553 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.622
ACS18506.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: vei:Veis_0615 xylose isomerase domain-containing protein.
  
  
 0.600
ACS20032.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pna:Pnap_1487 xylose isomerase domain-containing protein.
  
  
 0.600
ACS18576.1
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class I and II; aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: pna:Pnap_3126 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.577
ACS18584.1
Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: tmz:Tmz1t_1130 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.577
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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