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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21469.1PFAM: inner-membrane translocator; KEGG: vei:Veis_3273 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (333 aa)    
Predicted Functional Partners:
ACS21470.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A3675 ABC sugar transporter, ATPase subunit.
 0.993
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.972
rbsA-2
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.972
rbsA-3
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.971
ACS21242.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_2132 ABC transporter related.
 0.970
ACS21468.1
KEGG: bph:Bphy_2242 ABC sugar transporter, periplasmic ligand binding protein.
 
 
 0.956
ACS19961.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_2713 ABC transporter related.
  
 0.949
ACS17007.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpy:Bphyt_3236 periplasmic binding protein/LacI transcriptional regulator.
 
 0.880
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.880
ACS17699.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_2251 ABC transporter-related protein.
 
 0.862
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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