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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21496.1KEGG: afw:Anae109_2979 hypothetical protein. (135 aa)    
Predicted Functional Partners:
ACS21497.1
KEGG: bbt:BBta_5025 hypothetical protein.
       0.781
ACS21498.1
KEGG: pna:Pnap_2741 hypothetical protein.
       0.781
ACS21494.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pna:Pnap_2739 integral membrane sensor signal transduction histidine kinase.
       0.780
ACS21495.1
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pna:Pnap_2740 two component transcriptional regulator.
       0.780
ACS21499.1
Hypothetical protein.
       0.639
ACS21493.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: rfr:Rfer_2188 zinc-binding alcohol dehydrogenase.
       0.522
ACS21500.1
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
       0.414
ACS21501.1
Phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: dac:Daci_0408 phosphotransferase system, phosphocarrier protein HPr.
       0.411
ACS21502.1
PFAM: PTS system fructose subfamily IIA component; KEGG: aav:Aave_0352 PTS system fructose subfamily IIA component.
       0.411
ACS21503.1
PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_0296 major facilitator superfamily MFS_1.
       0.411
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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