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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21519.1KEGG: pol:Bpro_2172 hypothetical protein. (528 aa)    
Predicted Functional Partners:
ACS21518.1
KEGG: pol:Bpro_2171 hypothetical protein.
       0.754
ACS18010.1
KEGG: dac:Daci_5313 hypothetical protein.
  
     0.683
ACS21916.1
Putative membrane protein involved in toxin uptake; KEGG: dac:Daci_2082 hypothetical protein.
 
     0.588
ACS17534.1
PFAM: putative esterase; KEGG: ank:AnaeK_2349 putative esterase.
  
     0.577
ACS16835.1
KEGG: cja:CJA_0124 hypothetical protein.
  
     0.574
ACS21072.1
KEGG: dac:Daci_2082 hypothetical protein.
 
     0.554
ACS17031.1
PFAM: Ricin B lectin; PKD domain containing protein; SMART: Ricin B lectin; PKD domain containing protein; KEGG: scl:sce8906 hypothetical protein.
  
     0.550
ACS21383.1
KEGG: sbn:Sbal195_2514 hypothetical protein.
  
     0.548
ACS21618.1
Hypothetical protein; KEGG: bmj:BMULJ_02752 glucoamylase.
  
     0.541
ACS21208.1
KEGG: cja:CJA_1396 putative hemolysin; TIGRFAM: outer membrane adhesin like proteiin; PFAM: von Willebrand factor type A; Cadherin; coagulase; SMART: von Willebrand factor type A; Cadherin.
  
     0.539
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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