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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21527.1KEGG: dac:Daci_0383 ferredoxin-like protein. (117 aa)    
Predicted Functional Partners:
ACS20686.1
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: pna:Pnap_0825 NADH dehydrogenase (quinone).
 
 
 0.852
ACS20115.1
KEGG: pol:Bpro_3244 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
  
  
 0.834
ACS20123.1
TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: dac:Daci_5176 NADH-quinone oxidoreductase, E subunit.
 
 
 0.781
ACS19636.1
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: bbr:BB1323 formate dehydrogenase subunit gamma.
 
 
 0.775
ACS19638.1
TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: mpt:Mpe_A3710 NAD-dependent formate dehydrogenase alpha subunit.
  
 
 0.775
ACS20676.1
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: pna:Pnap_0834 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.775
ACS20685.1
TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: pnu:Pnuc_1109 formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.775
ACS21528.1
PFAM: VanZ family protein; KEGG: rfr:Rfer_3803 VanZ like protein.
 
     0.764
ACS21820.1
KEGG: pap:PSPA7_4124 hypothetical protein.
  
 
 0.735
ACS21529.1
PFAM: conserved hypothetical protein; KEGG: aav:Aave_0328 hypothetical protein.
       0.711
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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