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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21528.1PFAM: VanZ family protein; KEGG: rfr:Rfer_3803 VanZ like protein. (371 aa)    
Predicted Functional Partners:
ACS21529.1
PFAM: conserved hypothetical protein; KEGG: aav:Aave_0328 hypothetical protein.
       0.844
ACS21527.1
KEGG: dac:Daci_0383 ferredoxin-like protein.
 
     0.764
ACS17155.1
KEGG: dia:Dtpsy_0348 putative site-specific recombinase transmembrane protein.
 
     0.753
ACS18993.1
KEGG: dia:Dtpsy_1955 putative transmembrane protein.
  
     0.733
ACS20740.1
KEGG: aav:Aave_3642 hypothetical protein.
  
     0.722
ACS21389.1
KEGG: pol:Bpro_0444 hypothetical protein.
 
     0.713
ACS19716.1
PFAM: protein of unknown function DUF748; KEGG: pol:Bpro_2872 protein of unknown function DUF748.
  
     0.711
ACS18028.1
PFAM: HemY domain protein; KEGG: aav:Aave_1996 HemY domain-containing protein.
 
     0.702
ACS21526.1
KEGG: aav:Aave_0331 putative transmembrane protein.
       0.694
ACS18284.1
KEGG: rfr:Rfer_2980 putative signal peptide protein.
  
     0.692
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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