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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21534.1Carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; KEGG: pna:Pnap_0188 carboxymethylenebutenolidase. (227 aa)    
Predicted Functional Partners:
ACS21911.1
PFAM: iron-containing alcohol dehydrogenase; KEGG: pol:Bpro_2063 iron-containing alcohol dehydrogenase.
  
 
 0.914
ACS22017.1
PFAM: iron-containing alcohol dehydrogenase; KEGG: reh:H16_B1417 alcohol dehydrogenase, class IV.
  
 
 0.914
ACS22696.1
PFAM: iron-containing alcohol dehydrogenase; KEGG: pol:Bpro_2063 iron-containing alcohol dehydrogenase.
  
 
 0.914
ACS21912.1
Hydroxyquinol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bpy:Bphyt_4110 hydroxyquinol 1,2-dioxygenase.
   
 
 0.911
ACS22244.1
Hydroxyquinol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: azc:AZC_1414 dioxygenase.
   
 
 0.911
ACS22702.1
PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: vei:Veis_4613 catechol 1,2-dioxygenase.
   
 
 0.911
ACS22626.1
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mes:Meso_2396 mandelate racemase/muconate lactonizing enzyme-like.
   
 
 0.908
ACS21535.1
PFAM: DSBA oxidoreductase; KEGG: pol:Bpro_0240 DsbA oxidoreductase.
       0.645
ACS21536.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_0239 short-chain dehydrogenase/reductase SDR.
 
   0.562
ACS21537.1
PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: pol:Bpro_0238 multiple antibiotic resistance (MarC)-related proteins.
       0.542
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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