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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21539.1PFAM: Extracellular ligand-binding receptor; KEGG: rfr:Rfer_3504 extracellular ligand-binding receptor. (389 aa)    
Predicted Functional Partners:
ACS21541.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_3502 ABC transporter related.
 
  
 0.933
ACS21543.1
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_3500 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.856
ACS21544.1
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_3499 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.847
ACS21542.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_3501 ABC transporter related.
 
  
 0.813
ACS17939.1
PFAM: inner-membrane translocator; KEGG: aav:Aave_1875 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.783
ACS18742.1
PFAM: inner-membrane translocator; KEGG: aav:Aave_1875 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.783
ACS19047.1
PFAM: inner-membrane translocator; KEGG: dac:Daci_2554 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.779
ACS22545.1
PFAM: inner-membrane translocator; KEGG: dac:Daci_0261 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.776
ACS21540.1
PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_3503 AMP-dependent synthetase and ligase.
 
    0.774
ACS22546.1
PFAM: inner-membrane translocator; KEGG: dac:Daci_0260 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.773
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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