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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21555.1PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: mms:mma_0126 TRAP-type mannitol/chloroaromatic compound transport system, small permease component. (222 aa)    
Predicted Functional Partners:
ACS21556.1
PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpe:RPE_0098 TRAP C4-dicarboxylate transport system permease DctM subunit.
  
 0.958
ACS21554.1
TRAP dicarboxylate transporter- DctP subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.904
ACS17977.1
PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: azc:AZC_4023 TRAP-type mannitol/chloroaromatic compound transport permease.
 
  
 0.811
ACS18224.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pna:Pnap_1503 TRAP dicarboxylate transporter, DctM subunit.
  
 0.806
ACS18223.1
TRAP dicarboxylate transporter- DctP subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.805
ACS16775.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_0558 TRAP dicarboxylate transporter-DctM subunit.
     0.459
ACS18258.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dia:Dtpsy_1375 TRAP dicarboxylate transporter, DctM subunit.
     0.453
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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