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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21581.1PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_3752 extracellular solute-binding protein family 1. (347 aa)    
Predicted Functional Partners:
ACS17749.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_1060 iron ABC transporter, permease protein, putative.
 
 
 0.983
ACS20316.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4317 ABC spermidine/putrescine transporter, inner membrane subunit.
 
 
 0.951
ACS17750.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rde:RD1_1061 Fe-ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.925
ACS20315.1
PFAM: extracellular solute-binding protein family 1; KEGG: bmj:BMULJ_01151 iron(III) transport system substrate-binding protein.
  
  
 0.924
ACS17748.1
PFAM: extracellular solute-binding protein family 1; KEGG: bms:BRA0720 ABC transporter, periplasmic substrate-binding protein.
  
  
 
0.904
ACS20317.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmj:BMULJ_01149 iron(III) transport system ATP-binding protein.
 
 
 0.883
ACS18013.1
PFAM: histidine kinase internal region; KEGG: dia:Dtpsy_2665 histidine kinase internal region.
   
   0.617
ACS21582.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mxa:MXAN_6792 transcriptional regulator, LysR family.
       0.601
ACS21579.1
KEGG: dac:Daci_1191 hypothetical protein.
       0.520
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
       0.519
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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