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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21591.1KEGG: bur:Bcep18194_B0551 hypothetical protein. (163 aa)    
Predicted Functional Partners:
ACS21590.1
PFAM: Monogalactosyldiacylglycerol synthase; Glycosyltransferase 28 domain; KEGG: bur:Bcep18194_B0550 monogalactosyldiacylglycerol synthase.
     
 0.815
ACS21589.1
PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: rfr:Rfer_3544 RNA-binding S4.
  
    0.552
ACS21588.1
KEGG: mxa:MXAN_6210 hypothetical protein.
       0.537
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
 0.533
ACS20213.1
PFAM: ferredoxin; FAD-binding 9 siderophore-interacting domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; cytochrome P450; KEGG: reh:H16_B1279 two domain protein: cytochrome P450.
   
 0.491
ACS21401.1
PFAM: cytochrome P450; FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bja:blr2882 bifunctional P-450:NADPH-P450 reductase.
   
 0.468
ACS18652.1
KEGG: pna:Pnap_2975 hypothetical protein.
   
 0.455
ACS21564.1
KEGG: bur:Bcep18194_B0775 cytochrome P450-like.
   
 0.455
ACS21587.1
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rme:Rmet_5326 two component transcriptional regulator, winged helix family.
  
  
 0.405
ACS20362.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: aav:Aave_3733 amino acid adenylation domain-containing protein.
   
 0.402
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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