close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21604.1PFAM: beta-lactamase domain protein; KEGG: hypothetical protein. (350 aa)    
Predicted Functional Partners:
ACS21603.1
PFAM: conserved hypothetical protein; KEGG: pna:Pnap_3526 hypothetical protein.
       0.590
ACS22715.1
PFAM: alpha/beta hydrolase fold; KEGG: plu:plu2160 hypothetical protein.
  
  
 0.520
ACS19401.1
KEGG: dar:Daro_0369 hypothetical protein.
  
     0.492
ACS16967.1
PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rfr:Rfer_0885 BFD-like (2Fe-2S)-binding protein.
 
 
 0.488
ACS22347.1
PFAM: manganese and iron superoxide dismutase; SMART: Rhodanese domain protein; KEGG: pol:Bpro_2502 manganese and iron superoxide dismutase.
 
 
 0.471
ACS22467.1
PFAM: alpha/beta hydrolase fold; KEGG: plu:plu2160 hypothetical protein.
  
  
 0.456
ACS22481.1
PFAM: alpha/beta hydrolase fold; KEGG: plu:plu2160 hypothetical protein.
  
  
 0.441
ACS22307.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: swi:Swit_3019 glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.424
ACS20649.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bav:BAV2072 ferredoxin reductase.
   
 0.416
ACS20901.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpe:BP0585 putative ferredoxin reductase.
   
 0.416
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.