close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21606.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_4337 short-chain dehydrogenase/reductase SDR. (256 aa)    
Predicted Functional Partners:
ACS21608.1
Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; KEGG: ajs:Ajs_0473 Crp/FNR family transcriptional regulator.
 
 
  0.721
ACS21605.1
KEGG: pna:Pnap_2620 hypothetical protein.
       0.709
ACS22091.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bja:blr3451 putative oxidoreductase.
  
     0.648
ACS20920.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mno:Mnod_3482 short-chain dehydrogenase/reductase SDR.
  
     0.624
ACS22088.1
PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: ccs:CCNA_01892 short chain dehydrogenase.
  
     0.612
ACS21607.1
KEGG: aav:Aave_4207 hypothetical protein.
       0.592
ACS19539.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: dia:Dtpsy_2008 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.563
ACS18160.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: swi:Swit_4190 short-chain dehydrogenase/reductase SDR.
  
     0.555
ACS17289.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: azo:azo1120 short chain dehydrogenase.
  
     0.549
ACS21987.1
PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: bur:Bcep18194_C7070 short chain dehydrogenase.
  
     0.545
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.