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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21624.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ara:Arad_3366 xylose ABC transporter. (258 aa)    
Predicted Functional Partners:
ACS21625.1
PFAM: inner-membrane translocator; KEGG: rlt:Rleg2_2926 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.975
ACS21626.1
TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; KEGG: atc:AGR_L_2505 D-xylose-binding periplasmic protein precursor.
 
 0.967
ACS21469.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_3273 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.802
ACS19962.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_2712 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.794
ACS19971.1
PFAM: inner-membrane translocator; KEGG: pol:Bpro_3204 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.793
ACS17701.1
PFAM: inner-membrane translocator; KEGG: aav:Aave_2249 inner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family.
 
 0.787
ACS17034.1
PFAM: inner-membrane translocator; KEGG: rle:pRL120758 putative permease component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.784
ACS17700.1
PFAM: inner-membrane translocator; KEGG: aav:Aave_2250 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.782
ACS21243.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_2131 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.778
ACS17005.1
PFAM: inner-membrane translocator; KEGG: bac:BamMC406_4722 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.774
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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