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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21626.1TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; KEGG: atc:AGR_L_2505 D-xylose-binding periplasmic protein precursor. (340 aa)    
Predicted Functional Partners:
ACS21625.1
PFAM: inner-membrane translocator; KEGG: rlt:Rleg2_2926 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.982
ACS21624.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ara:Arad_3366 xylose ABC transporter.
 
 0.967
ACS17698.1
PFAM: inner-membrane translocator; KEGG: lch:Lcho_3198 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.829
ACS17697.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lch:Lcho_3199 ABC transporter-related protein.
  
 0.736
ACS17695.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_2255 periplasmic binding protein/LacI transcriptional regulator.
 
  
 0.706
ACS17701.1
PFAM: inner-membrane translocator; KEGG: aav:Aave_2249 inner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.683
ACS21468.1
KEGG: bph:Bphy_2242 ABC sugar transporter, periplasmic ligand binding protein.
 
  
 0.678
ACS17700.1
PFAM: inner-membrane translocator; KEGG: aav:Aave_2250 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.657
ACS21469.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_3273 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.559
ACS21623.1
PFAM: ROK family protein; KEGG: csa:Csal_1730 transcriptional repressor of the xylose operon.
 
     0.478
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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