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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS21668.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_0368 transcriptional regulator, LysR family. (321 aa)    
Predicted Functional Partners:
ACS17903.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbr:BB3137 LysR family transcriptional regulator.
  
     0.733
ACS21667.1
PFAM: Ferritin Dps family protein; KEGG: pna:Pnap_0325 ferritin, Dps family protein; Belongs to the Dps family.
 
   
 0.727
ACS21990.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbr:BB2780 LysR family transcriptional regulator.
  
     0.724
ACS22466.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet3900 LysR family transcriptional regulator.
  
     0.720
ACS22714.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet3900 LysR family transcriptional regulator.
  
     0.694
ACS17365.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reu:Reut_A1656 regulatory protein, LysR:LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.690
ACS22539.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_5634 LysR family transcriptional regulator.
  
     0.678
ACS21432.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bam:Bamb_0106 LysR family transcriptional regulator.
  
     0.675
ACS22266.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_1392 LysR family transcriptional regulator.
  
     0.671
ACS17479.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rfr:Rfer_3465 LysR family transcriptional regulator.
  
     0.649
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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