STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS22825.1PFAM: amidohydrolase 2; KEGG: pol:Bpro_3820 amidohydrolase 2. (290 aa)    
Predicted Functional Partners:
ACS22824.1
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: pol:Bpro_3810 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
     0.800
ACS22332.1
PFAM: amidohydrolase 2; KEGG: azo:azo2542 4-oxalomesaconate hydratase.
 
   
 0.776
ACS22331.1
TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; KEGG: pna:Pnap_2031 hypothetical protein.
 
   
 0.677
ACS22823.1
PFAM: conserved hypothetical protein; KEGG: pol:Bpro_3809 uncharacterized protein UPF0065.
       0.640
ACS22329.1
PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; KEGG: pna:Pnap_2165 6-phosphogluconate dehydrogenase, NAD-binding.
 
     0.617
ACS22333.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_6554 LysR family transcriptional regulator.
  
     0.571
ACS21925.1
PFAM: protein of unknown function DUF718; KEGG: bph:Bphy_6338 hypothetical protein.
  
  
 0.412
ACS20923.1
PFAM: protein of unknown function DUF453; KEGG: rsk:RSKD131_4240 methylitaconate delta2-delta3-isomerase.
 
   
 0.401
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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