STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM07083.1Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family. (261 aa)    
Predicted Functional Partners:
AKM08614.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.940
AKM08088.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
 0.919
AKM07723.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
  
 0.764
AKM06282.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
  
 0.763
AKM07684.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
  
 0.758
AKM07689.1
Acyl-CoA dehydrogenase-like protein; Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
  
 0.758
AKM08503.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
  
 0.758
AKM08616.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
  
 0.758
AKM07745.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
  
 0.757
AKM07873.1
Putative glutaryl-CoA dehydrogenase protein; Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
  
 0.757
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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