STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06204.1Pfam:pfam05071 NADH ubiquinone oxidoreductase subunit NDUFA12. (132 aa)    
Predicted Functional Partners:
AKM06790.1
NADH-ubiquinone oxidoreductase-related protein; Pfam:pfam04800 ETC complex I subunit conserved region.
  
    0.788
AKM06203.1
Hypothetical protein; Pfam:pfam02643 Uncharacterized ACR, COG1430.
       0.652
AKM06202.1
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
       0.633
AKM08744.1
Preprotein translocase subunit Tim44; Pfam:pfam04280 Tim44-like domain.
  
     0.546
AKM08705.1
Pfam:pfam06793 Uncharacterized protein family (UPF0262); Belongs to the UPF0262 family.
  
   
 0.532
AM2010_18
Cytochrome C.
  
     0.524
AKM06201.1
Acyl-CoA synthase; Pfam:pfam00501 AMP-binding enzyme.
       0.495
AKM06289.1
Hypothetical protein; Pfam:pfam04386 Stringent starvation protein B.
 
   
 0.494
AKM06444.1
Pfam:pfam07542 ATP12 chaperone protein.
  
   
 0.479
AKM06944.1
Putative methyltransferase.
  
     0.459
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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