STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06224.1Hypothetical protein. (428 aa)    
Predicted Functional Partners:
AKM06222.1
Pfam:pfam00006 ATP synthase alpha/beta family, nucleotide-binding domain.
       0.770
AKM06223.1
Hypothetical protein.
       0.770
fliE
Pfam:pfam02049 Flagellar hook-basal body complex protein FliE.
       0.759
AKM06220.1
Flagellar motor switch protein; Pfam:pfam01706 FliG C-terminal domain.
       0.759
AKM06221.1
Flagellar biosynthesis/type III secretory pathway protein; Pfam:pfam02108 Flagellar assembly protein FliH.
       0.759
AKM06217.1
Fis family transcriptional regulator; Pfam:pfam00158 Sigma-54 interaction domain.
       0.757
AKM06219.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
       0.757
AKM06226.1
Hypothetical protein; Pfam:pfam01052 Surface presentation of antigens (SPOA).
       0.689
AKM06225.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
       0.683
AKM06228.1
Flagellar biogenesis protein.
       0.667
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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