STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM07730.1Flavin-containing monooxygenase FMO; Pfam:pfam13738 Pyridine nucleotide-disulphide oxidoreductase. (496 aa)    
Predicted Functional Partners:
AKM08351.1
Pfam:pfam00067 Cytochrome P450.
 
 
 0.670
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
   0.656
atpG
ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.607
AKM08373.1
Pfam:pfam03435 Saccharopine dehydrogenase.
  
   
 0.592
AKM08599.1
Acetyl-CoA acetyltransferase.
  
 
 
 0.576
AKM07729.1
Hypothetical protein.
       0.574
AKM07748.1
Pfam:pfam08223 PaaX-like protein C-terminal domain.
  
     0.537
rplQ
Pfam:pfam01196 Ribosomal protein L17.
   
   0.536
AKM08568.1
Pfam:pfam12697 Alpha/beta hydrolase family.
 
 
 0.535
AKM06273.1
YbhB and YbcL; Pfam:pfam01161 Phosphatidylethanolamine-binding protein.
   
 
 0.528
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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