STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06270.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
AKM07201.1
Hypothetical protein; Pfam:pfam00593 TonB dependent receptor.
  
     0.752
AKM08170.1
Molecular chaperone DnaJ.
  
     0.703
AKM06213.1
Outer membrane transport energization protein TonB; Pfam:pfam03544 Gram-negative bacterial TonB protein C-terminal.
  
     0.653
AKM07988.1
Pfam:pfam00593 TonB dependent receptor.
  
     0.653
AKM07508.1
Metal transporter; Pfam:pfam02321 Outer membrane efflux protein.
  
     0.627
AKM07509.1
Metal transporter; Pfam:pfam12700 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.610
AKM07499.1
Hypothetical protein.
  
     0.598
AKM07400.1
Phenylacetic acid degradation-related protein; Pfam:pfam03061 Thioesterase superfamily.
  
     0.585
AKM07674.1
Type VI secretion protein; Pfam:pfam04610 TrbL/VirB6 plasmid conjugal transfer protein.
  
     0.575
AKM07876.1
Autotransporter beta-domain-containing protein; Pfam:pfam03797 Autotransporter beta-domain.
  
     0.572
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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