STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM07957.1Hypothetical protein; Pfam:pfam04888 Secretion system effector C (SseC) like family. (4034 aa)    
Predicted Functional Partners:
AKM07956.1
Hypothetical protein.
       0.773
AKM07980.1
Hypothetical protein.
  
    0.697
AKM07109.1
Pfam:pfam02397 Bacterial sugar transferase.
   
    0.695
AKM08240.1
Pfam:pfam02397 Bacterial sugar transferase.
   
    0.695
AKM07362.1
ATPase; Pfam:pfam12128 Protein of unknown function (DUF3584).
  
 
 0.673
smc
Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.673
AKM07958.1
Pfam:pfam06429 Flagellar basal body rod FlgEFG protein C-terminal.
 
     0.473
fliE-2
Pfam:pfam02049 Flagellar hook-basal body complex protein FliE.
 
     0.469
AKM07963.1
Putative flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
     0.451
AKM08128.1
Hypothetical protein; Pfam:pfam13550 Putative phage tail protein.
  
  
 0.418
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.