STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06280.1Pfam:pfam01636 Phosphotransferase enzyme family. (361 aa)    
Predicted Functional Partners:
AKM06282.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 0.995
AKM06281.1
Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
  
  
 0.790
AKM07684.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 
 0.622
AKM07658.1
Alcohol dehydrogenase, zinc-containing; Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
 
   0.616
dapD
Pfam:pfam14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal; Belongs to the transferase hexapeptide repeat family.
       0.606
AKM08503.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 
 0.595
AKM06283.1
Pfam:pfam13347 MFS/sugar transport protein.
       0.553
AKM06284.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 
 0.524
AKM07887.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.521
AKM08482.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 
 0.472
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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