STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06285.1Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain. (379 aa)    
Predicted Functional Partners:
AKM06284.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
     0.970
AKM07887.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.899
AKM07881.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
     0.874
AKM08220.1
Electron transfer flavoprotein, alpha subunit; Pfam:pfam00766 Electron transfer flavoprotein FAD-binding domain.
 
 0.826
AKM08219.1
Pfam:pfam01012 Electron transfer flavoprotein domain.
 
 
 0.798
AKM06286.1
Short-chain dehydrogenase/reductase SDR; Pfam:pfam00106 short chain dehydrogenase.
 
  0.795
AM2010_75
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.772
AKM06466.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family.
 
 0.769
AKM07083.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family.
  
 0.730
AKM07686.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.730
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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