STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06286.1Short-chain dehydrogenase/reductase SDR; Pfam:pfam00106 short chain dehydrogenase. (270 aa)    
Predicted Functional Partners:
AKM08585.1
3-ketoacyl-ACP reductase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
  
  
 
0.917
AKM08596.1
Pfam:pfam04295 D-galactarate dehydratase / Altronate hydrolase, C terminus.
    
 0.903
AKM06906.1
Pfam:pfam02502 Ribose/Galactose Isomerase.
  
 
 0.845
AKM07798.1
2-dehydro-3-deoxygluconokinase; Pfam:pfam00294 pfkB family carbohydrate kinase.
  
 0.830
AKM08586.1
Pfam:pfam00294 pfkB family carbohydrate kinase.
  
 0.828
AKM08367.1
Pfam:pfam00834 Ribulose-phosphate 3 epimerase family; Belongs to the ribulose-phosphate 3-epimerase family.
   
 
 0.804
AKM06285.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
 
  0.795
AKM07581.1
3-oxoacyl-ACP reductase; Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.762
AKM08639.1
Oxidoreductase; Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.751
AKM06509.1
Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.745
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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