STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM08063.1Pfam:pfam01144 Coenzyme A transferase. (211 aa)    
Predicted Functional Partners:
AKM08061.1
3-oxoacid CoA-transferase subunit A; Pfam:pfam01144 Coenzyme A transferase.
 0.999
AKM07022.1
3-oxoacid CoA-transferase, A subunit; Pfam:pfam01144 Coenzyme A transferase.
 0.999
AKM07887.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.957
AKM07722.1
Hydroxymethylglutaryl-CoA lyase; Pfam:pfam00682 HMGL-like.
  
 
 0.932
AKM08088.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 
 0.919
AKM08391.1
acetoacetyl-CoA reductase; Pfam:pfam00106 short chain dehydrogenase.
  
 0.912
AKM06656.1
Pfam:pfam00106 short chain dehydrogenase.
  
 0.912
AKM07023.1
Pfam:pfam01144 Coenzyme A transferase.
  
  
 
0.902
AKM08062.1
Hypothetical protein.
       0.786
AKM08064.1
Putative conserved membrane-anchored protein; Pfam:pfam02515 CoA-transferase family III; Belongs to the CoA-transferase III family.
     
 0.785
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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