STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM08072.1Hypothetical protein; Pfam:pfam00924 Mechanosensitive ion channel. (473 aa)    
Predicted Functional Partners:
AKM06838.1
General stress protein CsbD; Pfam:pfam05532 CsbD-like; Belongs to the UPF0337 (CsbD) family.
 
  
 0.900
AKM08073.1
PmbA protein; Pfam:pfam01523 Putative modulator of DNA gyrase.
       0.808
AKM08074.1
Hypothetical protein.
       0.650
AKM06387.1
Catalase; Pfam:pfam00199 Catalase; Belongs to the catalase family.
  
  
 0.621
AKM07004.1
TrkA family protein; Pfam:pfam00999 Sodium/hydrogen exchanger family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
 0.594
AKM07259.1
Glutathione-regulated potassium-efflux system protein; Pfam:pfam00999 Sodium/hydrogen exchanger family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
 0.587
AKM08075.1
ABC-type transport system ATPase component; Pfam:pfam00005 ABC transporter.
 
    0.576
AKM07532.1
OmpA/MotB domain protein; Pfam:pfam04355 SmpA / OmlA family.
  
  
 0.570
AKM08174.1
OmpA/MotB domain protein; Pfam:pfam04355 SmpA / OmlA family.
  
  
 0.570
AKM06380.1
SmpA / OmlA family.
  
  
 0.570
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.