Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKM06217.1 | AKM08076.1 | AM2010_127 | AM2010_2014 | Fis family transcriptional regulator; Pfam:pfam00158 Sigma-54 interaction domain. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.791 |
| AKM06854.1 | AKM08076.1 | AM2010_774 | AM2010_2014 | Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.827 |
| AKM07040.1 | AKM08076.1 | AM2010_963 | AM2010_2014 | NtrC, nitrogen regulation protein NtrC; Pfam:pfam00158 Sigma-54 interaction domain. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.790 |
| AKM07107.1 | AKM08076.1 | AM2010_1032 | AM2010_2014 | Fis family transcriptional regulator; Pfam:pfam00158 Sigma-54 interaction domain. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.782 |
| AKM07348.1 | AKM07639.1 | AM2010_1275 | AM2010_1570 | Sigma-54 dependent DNA-binding response regulator; Pfam:pfam00158 Sigma-54 interaction domain. | Transcriptional regulator; Pfam:pfam00158 Sigma-54 interaction domain. | 0.410 |
| AKM07348.1 | AKM08076.1 | AM2010_1275 | AM2010_2014 | Sigma-54 dependent DNA-binding response regulator; Pfam:pfam00158 Sigma-54 interaction domain. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.786 |
| AKM07639.1 | AKM07348.1 | AM2010_1570 | AM2010_1275 | Transcriptional regulator; Pfam:pfam00158 Sigma-54 interaction domain. | Sigma-54 dependent DNA-binding response regulator; Pfam:pfam00158 Sigma-54 interaction domain. | 0.410 |
| AKM07639.1 | AKM08076.1 | AM2010_1570 | AM2010_2014 | Transcriptional regulator; Pfam:pfam00158 Sigma-54 interaction domain. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.844 |
| AKM08076.1 | AKM06217.1 | AM2010_2014 | AM2010_127 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Fis family transcriptional regulator; Pfam:pfam00158 Sigma-54 interaction domain. | 0.791 |
| AKM08076.1 | AKM06854.1 | AM2010_2014 | AM2010_774 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | 0.827 |
| AKM08076.1 | AKM07040.1 | AM2010_2014 | AM2010_963 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | NtrC, nitrogen regulation protein NtrC; Pfam:pfam00158 Sigma-54 interaction domain. | 0.790 |
| AKM08076.1 | AKM07107.1 | AM2010_2014 | AM2010_1032 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Fis family transcriptional regulator; Pfam:pfam00158 Sigma-54 interaction domain. | 0.782 |
| AKM08076.1 | AKM07348.1 | AM2010_2014 | AM2010_1275 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sigma-54 dependent DNA-binding response regulator; Pfam:pfam00158 Sigma-54 interaction domain. | 0.786 |
| AKM08076.1 | AKM07639.1 | AM2010_2014 | AM2010_1570 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator; Pfam:pfam00158 Sigma-54 interaction domain. | 0.844 |
| AKM08076.1 | rpoA | AM2010_2014 | AM2010_526 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.939 |
| AKM08076.1 | rpoB | AM2010_2014 | AM2010_1980 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.928 |
| AKM08076.1 | rpoC | AM2010_2014 | AM2010_1979 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta'''; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.935 |
| AKM08076.1 | rpoZ | AM2010_2014 | AM2010_2647 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.892 |
| rpoA | AKM08076.1 | AM2010_526 | AM2010_2014 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.939 |
| rpoA | rpoB | AM2010_526 | AM2010_1980 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
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