STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06299.1Glucose/galactose transporter; Pfam:pfam07690 Major Facilitator Superfamily. (430 aa)    
Predicted Functional Partners:
AKM06300.1
Alpha-glucosidase; Pfam:pfam10566 Glycoside hydrolase 97.
 
     0.767
AKM06298.1
Crp/Fnr family transcriptional regulator; Pfam:pfam13545 Crp-like helix-turn-helix domain.
       0.481
AKM06878.1
Amidohydrolase; Pfam:pfam04909 Amidohydrolase.
  
  
 0.454
AKM08200.1
Glucan 1,4-beta-glucosidase; Pfam:pfam00933 Glycosyl hydrolase family 3 N terminal domain.
 
     0.453
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
 0.412
AKM07800.1
MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily.
  
  
 0.411
AKM06302.1
Glycoside hydrolase, family 3-like protein; Pfam:pfam00933 Glycosyl hydrolase family 3 N terminal domain; Belongs to the glycosyl hydrolase 3 family.
 
     0.404
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.