STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06330.1Permease. (307 aa)    
Predicted Functional Partners:
AKM06329.1
Pfam:pfam00724 NADH:flavin oxidoreductase / NADH oxidase family.
       0.602
AKM07076.1
tRNA-binding protein; Pfam:pfam01588 Putative tRNA binding domain.
 
   0.601
AKM07322.1
Hypothetical protein; Pfam:pfam13463 Winged helix DNA-binding domain.
 
   
 0.587
AKM07741.1
Hypothetical protein.
 
  
 0.524
AKM07855.1
Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family.
 
     0.483
AKM07701.1
Transcriptional regulator.
  
     0.479
AKM08083.1
Pfam:pfam03949 Malic enzyme, NAD binding domain.
  
  
 0.470
AKM06711.1
ATP synthase protein I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.
  
     0.465
AKM08394.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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