STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM08481.1Thioesterase; Pfam:pfam13279 Thioesterase-like superfamily. (140 aa)    
Predicted Functional Partners:
AKM08486.1
salicylyl-CoA 5-hydroxylase; Pfam:pfam00724 NADH:flavin oxidoreductase / NADH oxidase family.
 
  
 0.956
AKM08483.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.953
AKM08484.1
Pfam:pfam12802 MarR family.
 
     0.952
AKM08480.1
Pfam:pfam01042 Endoribonuclease L-PSP.
 
     0.943
AKM08482.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
   
 0.931
AKM08485.1
Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.911
ubiA
4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
     
 0.903
AKM08479.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
     
 0.752
AKM08473.1
Indolepyruvate oxidoreductase subunit B; Pfam:pfam01558 Pyruvate ferredoxin/flavodoxin oxidoreductase.
 
     0.597
AKM08474.1
Indolepyruvate ferredoxin oxidoreductase; Pfam:pfam02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
 
     0.559
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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