STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06333.1Pfam:pfam02028 BCCT family transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (662 aa)    
Predicted Functional Partners:
AKM08543.1
ABC transporter permease protein; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system.
 
   
 0.566
nadA
Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
     
 0.547
AKM07848.1
Proline:sodium symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.531
AKM08143.1
Dehydrogenase (Polyethylene glycol dehydrogenase, alcoholdehydrogenase, L-sorbose dehydrogenase); Pfam:pfam00732 GMC oxidoreductase.
  
  
 0.524
AKM06331.1
Hypothetical protein; Pfam:pfam10011 Predicted membrane protein (DUF2254).
       0.461
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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