STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06338.1Pfam:pfam04325 Protein of unknown function (DUF465). (65 aa)    
Predicted Functional Partners:
AKM06337.1
Putative transcriptional regulator, AraC family protein; Pfam:pfam07323 Protein of unknown function (DUF1465).
       0.627
AKM06339.1
Putative small protein.
       0.591
AKM06533.1
Hypothetical protein; Pfam:pfam10722 Putative bacterial sensory transduction regulator.
  
     0.520
AKM07562.1
Cobalt chelatase; Pfam:pfam11775 Cobalamin biosynthesis protein CobT VWA domain.
  
     0.463
AKM06340.1
Peptidase; Pfam:pfam02896 PEP-utilizing enzyme, TIM barrel domain; Belongs to the PEP-utilizing enzyme family.
       0.451
AKM08705.1
Pfam:pfam06793 Uncharacterized protein family (UPF0262); Belongs to the UPF0262 family.
  
     0.448
AKM06436.1
Hypothetical protein; Pfam:pfam09608 Putative transmembrane protein (Alph_Pro_TM).
  
     0.412
AKM06999.1
Pfam:pfam00582 Universal stress protein family.
  
     0.407
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.