STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM08630.1Thiolase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family. (417 aa)    
Predicted Functional Partners:
AKM07887.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.987
AKM08631.1
Pfam:pfam00171 Aldehyde dehydrogenase family.
 
 
 0.831
AKM08628.1
Hypothetical protein; Pfam:pfam03061 Thioesterase superfamily.
 
   
 0.825
AKM08088.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 
 0.823
AKM08629.1
2-nitropropane dioxygenase; Pfam:pfam03060 Nitronate monooxygenase.
 
    0.761
AKM08632.1
9-cis-epoxycarotenoid dioxygenase; Pfam:pfam03055 Retinal pigment epithelial membrane protein.
 
     0.705
AKM07746.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.700
AKM07744.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.696
AKM08599.1
Acetyl-CoA acetyltransferase.
 
 0.691
AKM07083.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family.
  
 0.655
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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