STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glkGlucokinase; Pfam:pfam02685 Glucokinase; Belongs to the bacterial glucokinase family. (325 aa)    
Predicted Functional Partners:
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 0.955
pgi
Pfam:pfam00342 Phosphoglucose isomerase; Belongs to the GPI family.
    
 0.939
AKM06345.1
Pfam:pfam01081 KDPG and KHG aldolase.
 
 
 0.935
AKM06239.1
6-phosphogluconolactonase; Pfam:pfam01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase.
 
  
 0.894
AKM07128.1
Transketolase; Pfam:pfam00456 Transketolase, thiamine diphosphate binding domain; Belongs to the transketolase family.
    
 0.872
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
  
 0.862
tal
Putative transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
    
 0.859
AKM06349.1
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
     
 0.841
AKM07690.1
Broad-specificity glycerol dehydrogenase; Pfam:pfam13360 PQQ-like domain.
     
 0.833
AKM07123.1
Pfam:pfam00274 Fructose-bisphosphate aldolase class-I.
     
  0.800
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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