STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06351.1Pfam:pfam01841 Transglutaminase-like superfamily. (277 aa)    
Predicted Functional Partners:
AKM07854.1
Hypothetical protein; Pfam:pfam04174 A circularly permuted ATPgrasp.
 
  
 0.849
AKM07853.1
Hypothetical protein; Pfam:pfam04168 A predicted alpha-helical domain with a conserved ER motif.
 
  
 0.838
AKM07851.1
Peptidase; Pfam:pfam00227 Proteasome subunit.
 
    0.749
glk
Glucokinase; Pfam:pfam02685 Glucokinase; Belongs to the bacterial glucokinase family.
       0.630
AKM06349.1
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
       0.622
AKM06352.1
Pfam:pfam13532 2OG-Fe(II) oxygenase superfamily.
       0.566
AKM06387.1
Catalase; Pfam:pfam00199 Catalase; Belongs to the catalase family.
   
   0.451
AKM07852.1
Pfam:pfam01841 Transglutaminase-like superfamily.
 
    
0.428
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.