STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06385.1Acetyltransferase; Pfam:pfam14542 GCN5-related N-acetyl-transferase. (117 aa)    
Predicted Functional Partners:
AKM06383.1
Short-chain dehydrogenase; Pfam:pfam02678 Pirin; Belongs to the pirin family.
       0.778
AKM06384.1
Pirin family protein; Pfam:pfam02678 Pirin; Belongs to the pirin family.
       0.778
AKM06838.1
General stress protein CsbD; Pfam:pfam05532 CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
    0.597
AKM06382.1
Hypothetical protein.
 
     0.408
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.