STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06391.1Putative transporter component; Pfam:pfam14241 Domain of unknown function (DUF4341). (143 aa)    
Predicted Functional Partners:
AKM06390.1
Transporter; Pfam:pfam04143 Sulphur transport.
 
   
 0.956
AKM06392.1
Beta-lactamase; Pfam:pfam00753 Metallo-beta-lactamase superfamily.
 
     0.889
AKM06393.1
Pfam:pfam01022 Bacterial regulatory protein, arsR family.
       0.809
AKM06389.1
TIGR01244 family protein; Pfam:pfam04273 Putative phosphatase (DUF442).
       0.785
cysC
Adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
    0.682
AKM06394.1
Hydrolase; Pfam:pfam00753 Metallo-beta-lactamase superfamily.
  
    0.607
AKM06541.1
Sulfite reductase (NADPH) hemoprotein beta-component; Pfam:pfam01077 Nitrite and sulphite reductase 4Fe-4S domain.
  
    0.471
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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