STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM06396.1Hypothetical protein; Pfam:pfam00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain. (252 aa)    
Predicted Functional Partners:
AKM06397.1
Hypothetical protein.
 
 
 0.997
AKM06398.1
Hypothetical protein.
  
 
 0.949
AKM06395.1
Hypothetical protein.
       0.548
AKM08128.1
Hypothetical protein; Pfam:pfam13550 Putative phage tail protein.
  
  
 0.468
AKM06567.1
Hypothetical protein.
  
  
 0.468
AKM07676.1
Pfam:pfam05101 Type IV secretory pathway, VirB3-like protein.
   
    0.412
AKM07752.1
Hypothetical protein; Pfam:pfam08479 POTRA domain, ShlB-type.
   
  
 0.401
AKM06369.1
Hypothetical protein; Pfam:pfam08479 POTRA domain, ShlB-type.
   
  
 0.401
Your Current Organism:
Altererythrobacter marensis
NCBI taxonomy Id: 543877
Other names: A. marensis, Altererythrobacter marensis Seo and Lee 2010, Altererythrobacter sp. MSW-14, DSM 21428, KCTC 22370, strain MSW-14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.